nipoppy.workflows.PipelineInstallWorkflow¶

class nipoppy.workflows.PipelineInstallWorkflow(dpath_root, source, zenodo_api=None, assume_yes=False, force=False, fpath_layout=None, verbose=False, dry_run=False)¶

Workflow for pipeline install command.

Parameters:

dpath_root (pathlib.Path)
source (nipoppy.env.StrOrPathLike | str)
zenodo_api (nipoppy.zenodo_api.ZenodoAPI)
assume_yes (bool)
force (bool)
fpath_layout (Optional[nipoppy.env.StrOrPathLike])
verbose (bool)
dry_run (bool)

run_main()¶

Install a pipeline.

The pipeline config directory is put in the appropriate location in the dataset, and any pipeline variables are added to the global config file.

assume_yes = False¶

dpath_pipeline = None¶

force = False¶

source¶

zenodo_api¶

zenodo_id = None¶