nipoppy init

Note

This command calls the nipoppy.workflows.dataset_init.InitWorkflow class from the Python API internally.

Initialize a new dataset.

usage: nipoppy init --dataset-root DATASET_ROOT [--layout FPATH_LAYOUT]
                    [--verbosity VERBOSITY] [--dry-run] [-h]

Named Arguments

--dataset-root

Path to the root of the dataset.

Global options

--layout

Path to a custom layout specification file, to be used instead of the default layout.

--verbosity

Verbosity level, from 0 (least verbose) to 3 (most verbose). Default: 2.

--dry-run

Print commands but do not execute them.