nipoppy.workflows.dataset_status.StatusWorkflow

class nipoppy.workflows.dataset_status.StatusWorkflow(dpath_root, fpath_layout=None, verbose=False, dry_run=False)

Workflow for status command.

Parameters:

  • dpath_root (pathlib.Path)

  • fpath_layout (Optional[nipoppy.env.StrOrPathLike])

  • verbose (bool)

  • dry_run (bool)

run_main()

Check the status of the dataset and report.

  1. Number of participants in manifest per BIDS datatype,

  2. Curation status information if available,

  3. Processing status information if available

col_pipeline = 'pipeline'